FHIR MCP Server
Bridges FHIR healthcare APIs to MCP clients, letting you search and retrieve clinical data through Claude Desktop, VS Code, or other MCP tools. Handles SMART-on-FHIR authentication flows including OAuth 2.0, so you can connect to Epic sandboxes, HAPI FHIR servers, and other compliant endpoints. Exposes FHIR operations as MCP tools for querying patient records, observations, and other healthcare resources. Ships with Docker support and works with both public FHIR servers and authenticated EHR systems. Solid choice when you need to analyze healthcare data with LLMs or build clinical decision support workflows.
- GitHub stars
- 137
- tools
- 7
- auth
- Required
- transport
- STDIO
- env var
- 1
- last updated
- Oct 29, 2026
Tools
7 toolsPublic tool metadata for what this MCP can expose to an agent.
get_capabilitiesRetrieves metadata about a specified FHIR resource type, including its supported search parameters and custom operations.
Retrieves metadata about a specified FHIR resource type, including its supported search parameters and custom operations.
No parameter schema in public metadata yet.
searchExecutes a standard FHIR search interaction on a given resource type, returning a bundle or list of matching resources.
Executes a standard FHIR search interaction on a given resource type, returning a bundle or list of matching resources.
No parameter schema in public metadata yet.
readPerforms a FHIR "read" interaction to retrieve a single resource instance by its type and resource ID, optionally refining the response with search parameters or custom operations.
Performs a FHIR "read" interaction to retrieve a single resource instance by its type and resource ID, optionally refining the response with search parameters or custom operations.
No parameter schema in public metadata yet.
createExecutes a FHIR "create" interaction to persist a new resource of the specified type.
Executes a FHIR "create" interaction to persist a new resource of the specified type.
No parameter schema in public metadata yet.
updatePerforms a FHIR "update" interaction by replacing an existing resource instance's content with the provided payload.
Performs a FHIR "update" interaction by replacing an existing resource instance's content with the provided payload.
No parameter schema in public metadata yet.
deleteExecute a FHIR "delete" interaction on a specific resource instance.
Execute a FHIR "delete" interaction on a specific resource instance.
No parameter schema in public metadata yet.
get_userRetrieves the currently authenticated user's FHIR resource (for example the linked `Patient` resource) and returns a concise profile containing available demographic fields such as `id`, `name`, and `birthDate`.
Retrieves the currently authenticated user's FHIR resource (for example the linked `Patient` resource) and returns a concise profile containing available demographic fields such as `id`, `name`, and `birthDate`.
No parameter schema in public metadata yet.
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FHIR_SERVER_BASE_URL*Base URL of the FHIR Server (eg: https://hapi.fhir.org/baseR5)
Readme
Model Context Protocol (MCP) Server for Fast Healthcare Interoperability Resources (FHIR) APIs
Details
- Repository
- github.com/wso2/fhir-mcp-server
- Website
- github.com/wso2/fhir-mcp-server
- Package
fhir-mcp-server- Transport
- STDIO
- Auth
- Required
- Registry
- MCP registry, active