
Tooluniverse Pharmacovigilance
This is a structured framework for post-market drug safety analysis using FAERS adverse event reports, FDA labels, and pharmacogenomic data. It pushes you to quantify signals with disproportionality measures like PRR and ROR rather than just describing risks, and includes clinical reasoning strategies like on-target versus off-target thinking and timeline-based mechanism classification. The compute-first approach means you write Python to calculate statistics rather than theorizing. Good for investigating safety signals, comparing drug profiles, or building pharmacovigilance reports when you need actual numbers and not just label summaries. The pharmacogenomic integration helps flag genetic risk factors for specific populations.
- skills.sh installs
- 424
- GitHub stars
- 1.8K
- last updated
- Aug 21, 2026
Install
$ npx -y skills add mims-harvard/tooluniverse --skill tooluniverse-pharmacovigilance --agent claude-codeInstalls into .claude/skills of the current project.
Files
COMPUTE, DON'T DESCRIBE
When analysis requires computation (statistics, data processing, scoring, enrichment), write and run Python code via Bash. Don't describe what you would do — execute it and report actual results. Use ToolUniverse tools to retrieve data, then Python (pandas, scipy, statsmodels, matplotlib) to analyze it.
Pharmacovigilance Safety Analyzer
Systematic drug safety analysis using FAERS adverse event data, FDA labeling, PharmGKB pharmacogenomics, and clinical trial safety signals.
KEY PRINCIPLES:
- Report-first approach - Create report file FIRST, update progressively
- Signal quantification - Use disproportionality measures (PRR, ROR)
- Severity stratification - Prioritize serious/fatal events
- Multi-source triangulation - FAERS, labels, trials, literature
- Pharmacogenomic context - Include genetic risk factors
- Actionable output - Risk-benefit summary with recommendations
- English-first queries - Always use English drug names in tool calls
When to Use
Sponsors
Details
- Repository
- github.com/mims-harvard/tooluniverse
- Category
- Python
- First seen
- Jun 3, 2026
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